Illumina HiSeq 2500 sequencing; S. arctica small RNAs - SRA

ERX9665742: Illumina HiSeq 2500 sequencing; S. arctica small RNAs
1 ILLUMINA (Illumina HiSeq 2500) run: 33.9M spots, 1.7G bases, 730Mb downloads

Submitted by: University of Oslo

Study: S. arctica small RNAs

We have sequenced the small RNA content of the ichthyosporean Sphaeroforma arctica across a time course of 72 hours,

Sample: Sarctica_CT24 Sarctica_smallRNA_C24h

Library:

Instrument: Illumina HiSeq 2500

Strategy: RNA-Seq

Source: TRANSCRIPTOMIC

Selection: cDNA

Layout: SINGLE

Construction protocol: The 50 bp single-end smallRNA libraries were prepared for sequencing with the NEBNext Small RNA Library Prep Set for Illumina.

Runs: 1 run, 33.9M spots, 1.7G bases, 730Mb

Run	# of Spots	# of Bases	Size	Published
ERR10128716	33,881,303	1.7G	730Mb	2022-10-18

Supplemental Content

hypothetical protein GCM10010219_09040 [Streptomyces netropsis]
hypothetical protein GCM10010219_09040 [Streptomyces netropsis]
gi|1903044979|dbj|GGR06733.1||gnl|W RW|GGR06733

Protein
NADH dehydrogenase subunit 3 (mitochondrion) [Parkesia noveboracensis]
NADH dehydrogenase subunit 3 (mitochondrion) [Parkesia noveboracensis]
gi|2445572307|gb|WDE84378.1|

Protein
RecName: Full=Mitochondrial import receptor subunit TOM20 homolog; AltName: Full...
RecName: Full=Mitochondrial import receptor subunit TOM20 homolog; AltName: Full=Mitochondrial 20 kDa outer membrane protein; AltName: Full=Outer mitochondrial membrane receptor Tom20
gi|166897638|sp|Q62760.2|TOM20_RAT

Protein
RecName: Full=Protein S100-A14; AltName: Full=S100 calcium-binding protein A14; ...
RecName: Full=Protein S100-A14; AltName: Full=S100 calcium-binding protein A14; Short=S114
gi|34395852|sp|Q9D2Q8.1|S10AE_MOUSE

Protein
Mus musculus BAC clone RP24-296O9 from chromosome 3, complete sequence
Mus musculus BAC clone RP24-296O9 from chromosome 3, complete sequence
gi|29164690|gb|AC127257.3||gnl|wugs 4-296O9

Nucleotide

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SRA